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04-03-2011, 05:09 PM
Our software program deals are divided to the subsequent classes:Sequencing/AssemblyGene FindingAnnotationGenome AnalysisMetagenomics AnalysisMicroarray ToolsProteomics ToolsComputational Management ToolsCloud Sequencing/Assembly AMOS Manipulation of input and output files linked to whole-genome shotgun assembly. Presently maintained at CBCB in the University of Maryland. Celera Assembler Celera Assembler can reconstruct extended sequences of genomic DNA given the fragmentary information made by whole-genome shotgun sequencing. DNA Barcode Deconvolution This really is a program library to run the JCVI barcode deconvolution pipeline utilizing Sun Grid Engine,Windows 7 Serial (http://www.windows7-key.eu/), or optionally with no need of the usage of a grid. Elvira Huge throughput assembly of amplicon reads for virus-sized genomes. JCVI Primer Designer Higher throughput PCR primer design and style software package. Lucy A tool for cleansing info created by automated Sanger DNA sequencers just before sequence assembly and other downstream uses. TIGR Assembler Enabled the primary published whole-genome assembly of the free-living organism in 1995. Last revised in 2003. Gene Acquiring Glimmer A microbial gene-finding model,Microsoft Office 2010 (http://www.office2010-key.eu/), especially in bacteria,Microsoft Office 2010 Key (http://www.office2010-key.ca/), archaea,Microsoft Office 2010 (http://www.office2010-key.co.uk/), and viruses. At present maintained at CBCB at the University of Maryland.